IFT46

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IFT46 protein abundance is significantly associated with the RNA expression of many other genes, with 11,008 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible IFT46-associated genes across cancer lineages are IQUB, SPEF1, and LRRC23. Each is linked with IFT46 in more than 6 cancer types. Because this analysis shows association rather than direction, both IFT46-to-partner and partner-to-IFT46 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, IFT46 versus IQUB in UCEC, with a Pearson correlation of 0.62.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IFT46→partner) and Y-score (partner→IFT46) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECIQUB →+1.181+0.422<.001<.00137
UCECSPEF1 →+1.620+0.315<.001<.00137
UCECLRRC23 →+1.490+0.401<.001<.00137
UCECDNAI1 →+2.018+0.426<.001<.00137
OVIQCK →+0.746+0.641.001<.00137
BRCACFAP91 →+0.874+0.442<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,008 associations by consensus.

IFT46 vs IQUB — UCEC

Per-sample scatter of IFT46 vs IQUB in UCEC (Pearson r = 0.62).

Explore this scatter interactively →

Exploration