IFT20

Across TCGA cell cohorts, IFT20 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,150 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible IFT20-associated GO terms across cancer lineages are COPII-coated vesicle budding, Endoplasmic reticulum to Golgi vesicle-mediated transport, and Glycophagy. Each is linked with IFT20 in more than 11 cancer types. Because this analysis shows association rather than direction, both IFT20-to-partner and partner-to-IFT20 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, COPII-coated vesicle budding grouped by IFT20-low versus IFT20-high in CNS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (IFT20→partner) and Y-score (partner→IFT20) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CNS	COPII-coated vesicle budding →	+0.078	+0.647	<.001	<.001	3	12
BONE	Endoplasmic reticulum to Golgi vesicle-mediated transport →	+0.073	+0.860	.003	<.001	3	10
SOFT_TISSUE	Glycophagy →	+0.138	+0.648	<.001	<.001	3	10
SOFT_TISSUE	Process utilizing autophagic mechanism →	+0.052	+0.542	<.001	<.001	3	10
SOFT_TISSUE	Autophagy →	+0.052	+0.542	<.001	<.001	3	10
SOFT_TISSUE	Endoplasmic reticulum unfolded protein response →	+0.072	+0.448	.002	.001	2	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,150 associations by consensus.

COPII-coated vesicle budding by IFT20 expression — CNS

Explore this box plot interactively →