IFNW1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IFNW1 mutation is significantly associated with the total protein of many other genes, with 5 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible IFNW1-associated genes across cancer lineages are GSK-3a-b_pS21_S9, Mre11, and Tuberin_pT1462. Each is linked with IFNW1 in more than 1 cancer types. Because this analysis shows association rather than direction, both IFNW1-to-partner and partner-to-IFNW1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GSK-3a-b_pS21_S9 grouped by IFNW1-low versus IFNW1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IFNW1→partner) and Y-score (partner→IFNW1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECGSK-3a-b_pS21_S9 →+0.456+2.179.041.03431
UCECMre11 →-0.127-3.321.004.01031
UCECTuberin_pT1462 →+0.390+3.009.001.01931
UCECHeregulin →-0.140-3.321.030.01021
UCECTuberin →+0.335+2.817.017.03621
Each partner links to its Q-omics profile. Showing the 5 strongest of 5 associations by consensus.

GSK-3a-b_pS21_S9 by IFNW1 expression — UCEC

Box plot of GSK-3a-b_pS21_S9 in IFNW1-low vs IFNW1-high samples in UCEC.

Explore this box plot interactively →

Exploration