IFNLR1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IFNLR1 mutation is significantly associated with the RNA expression of many other genes, with 1,937 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible IFNLR1-associated genes across cancer lineages are RNU1-17P, SUPV3L1, and IQCC. Each is linked with IFNLR1 in more than 1 cancer types. Because this analysis shows association rather than direction, both IFNLR1-to-partner and partner-to-IFNLR1 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IFNLR1→partner) and Y-score (partner→IFNLR1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADRNU1-17P →+0.344+7.734<.001<.00132
UCECSUPV3L1 →+0.392+2.595.003<.00132
UCECIQCC →+0.558+2.584<.001.00132
UCECCDC25A →+0.571+2.168.007.00932
UCECREEP4 →+0.521+2.617.001.00532
UCECSHCBP1 →+0.663+2.595<.001.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,937 associations by consensus.

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