IFNGR2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, IFNGR2 mutation is significantly associated with the RNA expression of many other genes, with 25 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible IFNGR2-associated genes across cancer lineages are OR7G2, REG1B, and KRTAP4-6. Each is linked with IFNGR2 in more than 1 cancer types. Because this analysis shows association rather than direction, both IFNGR2-to-partner and partner-to-IFNGR2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR7G2 grouped by IFNGR2-low versus IFNGR2-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IFNGR2→partner) and Y-score (partner→IFNGR2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaOR7G2 →+0.032+5.201<.001.00631
BLOOD_LeukemiaREG1B →+0.132+4.922<.001.00931
BLOOD_LeukemiaKRTAP4-6 →+0.052+5.201<.001.00631
BLOOD_LeukemiaOPN1MW →+0.062+5.539<.001.00331
LUNG_SCLCIL36A →+0.026+5.643<.001.00231
LUNG_SCLCOR7G3 →+0.063+5.643<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 25 associations by consensus.

OR7G2 by IFNGR2 expression — BLOOD_Leukemia

Box plot of OR7G2 in IFNGR2-low vs IFNGR2-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration