IFI27

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IFI27 mutation is significantly associated with the RNA expression of many other genes, with 85 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible IFI27-associated genes across cancer lineages are LINC02283, OR5D15P, and RN7SKP295. Each is linked with IFI27 in more than 1 cancer types. Because this analysis shows association rather than direction, both IFI27-to-partner and partner-to-IFI27 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LINC02283 grouped by IFI27-low versus IFI27-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IFI27→partner) and Y-score (partner→IFI27) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMLINC02283 →+0.105+5.469.004.00232
UCECOR5D15P →+0.051+4.453.007.00632
SKCMRN7SKP295 →+0.204+4.680.004.00732
SKCMLINC02855 →+0.132+4.875<.001.00232
SKCMGTF2F2P2 →+0.051+4.970<.001.00531
SKCMNEURL1-AS1 →+0.147+4.867<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 85 associations by consensus.

LINC02283 by IFI27 expression — SKCM

Box plot of LINC02283 in IFI27-low vs IFI27-high samples in SKCM.

Explore this box plot interactively →

Exploration