ICMT

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ICMT mutation is significantly associated with the total protein of many other genes, with 33 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ICMT-associated genes across cancer lineages are Ku80, Annexin-1, and Shc_pY317. Each is linked with ICMT in more than 1 cancer types. Because this analysis shows association rather than direction, both ICMT-to-partner and partner-to-ICMT results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Ku80 grouped by ICMT-low versus ICMT-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ICMT→partner) and Y-score (partner→ICMT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECKu80 →+0.214+1.335.018.04632
UCECAnnexin-1 →+0.732+2.584<.001.01032
UCECShc_pY317 →-0.175-2.000.002.03032
UCECCaspase-7-cleavedD198 →+0.556+2.479.014.01032
UCEC14-3-3_beta →-0.097-2.432.011.01831
UCECeIF4G →+0.347+2.807.003.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 33 associations by consensus.

Ku80 by ICMT expression — UCEC

Box plot of Ku80 in ICMT-low vs ICMT-high samples in UCEC.

Explore this box plot interactively →

Exploration