IBA57

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, IBA57 mutation is significantly associated with the RNA expression of many other genes, with 13 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible IBA57-associated genes across cancer lineages are GRM4, C1QL2, and NAA11. Each is linked with IBA57 in more than 1 cancer types. Because this analysis shows association rather than direction, both IBA57-to-partner and partner-to-IBA57 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GRM4 grouped by IBA57-low versus IBA57-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IBA57→partner) and Y-score (partner→IBA57) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEGRM4 →+1.127+3.491<.001.00431
LARGE_INTESTINEC1QL2 →+0.004+3.514.006.00131
LARGE_INTESTINENAA11 →+0.347+3.443.002.00931
LARGE_INTESTINEOR10W1 →+0.014+3.562<.001.00231
LARGE_INTESTINEC10orf53 →+0.010+3.217.002.00631
LARGE_INTESTINETAFA1 →+0.234+3.103.002.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 13 associations by consensus.

GRM4 by IBA57 expression — LARGE_INTESTINE

Box plot of GRM4 in IBA57-low vs IBA57-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration