IAPP

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IAPP protein abundance is significantly associated with the RNA expression of many other genes, with 1,522 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible IAPP-associated genes across cancer lineages are SEZ6L, LGALS1, and POLR2F. Each is linked with IAPP in more than 1 cancer types. Because this analysis shows association rather than direction, both IAPP-to-partner and partner-to-IAPP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, IAPP versus SEZ6L in PDAC, with a Pearson correlation of 0.45.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IAPP→partner) and Y-score (partner→IAPP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACSEZ6L →+0.527+1.015.001<.00131
PDACLGALS1 →-0.502-0.994.004.00431
PDACPOLR2F →-0.238-1.275<.001<.00131
PDACSEPTIN3 →+0.309+0.786<.001.00531
PDACTTLL1 →-0.266-1.347.003.00131
PDACTOM1 →-0.230-0.813.009.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,522 associations by consensus.

IAPP vs SEZ6L — PDAC

Per-sample scatter of IAPP vs SEZ6L in PDAC (Pearson r = 0.45).

Explore this scatter interactively →

Exploration