HSPA12B

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, HSPA12B mutation is significantly associated with the RNA expression of many other genes, with 8 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible HSPA12B-associated genes across cancer lineages are APOL5, HHLA1, and MAGEL2. Each is linked with HSPA12B in more than 1 cancer types. Because this analysis shows association rather than direction, both HSPA12B-to-partner and partner-to-HSPA12B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, APOL5 grouped by HSPA12B-low versus HSPA12B-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HSPA12B→partner) and Y-score (partner→HSPA12B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaAPOL5 →+0.014+4.060<.001.00331
BLOOD_LeukemiaHHLA1 →+0.009+3.551<.001.00931
BLOOD_LeukemiaMAGEL2 →+0.527+4.133<.001.00331
LARGE_INTESTINEAVP →+0.056+3.632<.001.00331
LARGE_INTESTINEG6PC2 →+0.031+3.658.001.00531
LARGE_INTESTINEELOA3DP →+0.030+3.688<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 8 associations by consensus.

APOL5 by HSPA12B expression — BLOOD_Leukemia

Box plot of APOL5 in HSPA12B-low vs HSPA12B-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration