HSP90AA1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, HSP90AA1 mutation is significantly associated with the RNA expression of many other genes, with 34 significant associations in total. CNS shows the largest number of these associations.

The most reproducible HSP90AA1-associated genes across cancer lineages are APOC3, SPATA16, and OR14A2. Each is linked with HSP90AA1 in more than 1 cancer types. Because this analysis shows association rather than direction, both HSP90AA1-to-partner and partner-to-HSP90AA1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, APOC3 grouped by HSP90AA1-low versus HSP90AA1-high in PANCREAS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HSP90AA1→partner) and Y-score (partner→HSP90AA1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASAPOC3 →+0.316+4.491<.001.00331
PANCREASSPATA16 →+0.042+4.011<.001.00931
PANCREASOR14A2 →+0.015+4.614<.001.00431
PANCREASOR2S2 →+0.015+4.614<.001.00431
PANCREASTBL1Y →+0.005+4.614<.001.00431
BLOOD_LymphomaSULT1C3 →+0.012+4.662<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 34 associations by consensus.

APOC3 by HSP90AA1 expression — PANCREAS

Box plot of APOC3 in HSP90AA1-low vs HSP90AA1-high samples in PANCREAS.

Explore this box plot interactively →

Exploration