HSDL1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HSDL1 mutation is significantly associated with the RNA expression of many other genes, with 2,118 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible HSDL1-associated genes across cancer lineages are LIN7C, COX15, and AASDHPPT. Each is linked with HSDL1 in more than 1 cancer types. Because this analysis shows association rather than direction, both HSDL1-to-partner and partner-to-HSDL1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LIN7C grouped by HSDL1-low versus HSDL1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HSDL1→partner) and Y-score (partner→HSDL1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECLIN7C →+0.591+3.593.002.00131
UCECCOX15 →+0.482+3.329.001.00531
UCECAASDHPPT →+0.561+3.332.004.00531
UCECGLB1L2 →-0.947-3.568<.001.00231
UCECTMEM138 →+0.304+3.483.002.00231
UCECEI24 →+0.528+3.700.002.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,118 associations by consensus.

LIN7C by HSDL1 expression — UCEC

Box plot of LIN7C in HSDL1-low vs HSDL1-high samples in UCEC.

Explore this box plot interactively →

Exploration