HSD17B2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, HSD17B2 mutation is significantly associated with the RNA expression of many other genes, with 16 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible HSD17B2-associated genes across cancer lineages are OPRM1, DMRTB1, and PABPC1L2A. Each is linked with HSD17B2 in more than 1 cancer types. Because this analysis shows association rather than direction, both HSD17B2-to-partner and partner-to-HSD17B2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OPRM1 grouped by HSD17B2-low versus HSD17B2-high in CNS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HSD17B2→partner) and Y-score (partner→HSD17B2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CNSOPRM1 →+0.028+4.169<.001.00831
CNSDMRTB1 →+0.018+4.643<.001.00331
CNSPABPC1L2A →+0.035+4.321<.001.00931
CNSPRSS58 →+0.068+5.285<.001<.00131
SKINOR2B2 →+0.027+4.684<.001.00231
SKINEDDM3B →+0.029+4.415<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 16 associations by consensus.

OPRM1 by HSD17B2 expression — CNS

Box plot of OPRM1 in HSD17B2-low vs HSD17B2-high samples in CNS.

Explore this box plot interactively →

Exploration