HSD17B1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, HSD17B1 mutation is significantly associated with the RNA expression of many other genes, with 6 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible HSD17B1-associated genes across cancer lineages are ODF1, WFDC12, and CTRB2. Each is linked with HSD17B1 in more than 1 cancer types. Because this analysis shows association rather than direction, both HSD17B1-to-partner and partner-to-HSD17B1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ODF1 grouped by HSD17B1-low versus HSD17B1-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HSD17B1→partner) and Y-score (partner→HSD17B1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaODF1 →+0.064+3.944.001.00631
BLOOD_LeukemiaWFDC12 →+0.198+3.874<.001.00531
BLOOD_LeukemiaCTRB2 →+0.081+3.855.001.00731
BLOOD_LeukemiaDEFB4A →+0.096+4.269.001.00231
LARGE_INTESTINEDEFA4 →+0.026+4.022<.001.00631
LARGE_INTESTINEFAM205A →+0.019+3.766.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 6 associations by consensus.

ODF1 by HSD17B1 expression — BLOOD_Leukemia

Box plot of ODF1 in HSD17B1-low vs HSD17B1-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration