HS3ST3B1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HS3ST3B1 protein abundance is significantly associated with the RNA expression of many other genes, with 429 significant associations in total. GBM shows the largest number of these associations.

The most reproducible HS3ST3B1-associated genes across cancer lineages are IL9, OR10A5, and ACER2P1. Each is linked with HS3ST3B1 in more than 1 cancer types. Because this analysis shows association rather than direction, both HS3ST3B1-to-partner and partner-to-HS3ST3B1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HS3ST3B1 versus IL9 in COAD, with a Pearson correlation of -0.81.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HS3ST3B1→partner) and Y-score (partner→HS3ST3B1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADIL9 →-0.250-1.223<.001.00131
COADOR10A5 →-0.150-1.223<.001.00131
COADACER2P1 →-0.186-1.223<.001.00131
COADMIR601 →-1.516-1.223.004.00122
COADPCDHA13 →-0.040-1.045.007.00831
COADLINC00682 →-0.046-0.978<.001.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 429 associations by consensus.

HS3ST3B1 vs IL9 — COAD

Per-sample scatter of HS3ST3B1 vs IL9 in COAD (Pearson r = -0.81).

Explore this scatter interactively →

Exploration