HPGDS

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, HPGDS RNA expression is significantly associated with the go_rna of many other GO terms, with 1,778 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible HPGDS-associated GO terms across cancer lineages are Positive regulation of protein localization to mitochondrion, Negative regulation of CD4-positive, alpha-beta T cell differentiation, and rRNA transcription. Each is linked with HPGDS in more than 4 cancer types. Because this analysis shows association rather than direction, both HPGDS-to-partner and partner-to-HPGDS results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of protein localization to mitochondrion grouped by HPGDS-low versus HPGDS-high in BLOOD_Leukemia.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (HPGDS→partner) and Y-score (partner→HPGDS) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaPositive regulation of protein localization to mitochondrion →+0.081+2.411<.001<.00135
CNSNegative regulation of CD4-positive, alpha-beta T cell differentiation →-0.133-0.032<.001.00334
BLOOD_MyelomarRNA transcription →+0.079+0.028.002.00634
BLOOD_LeukemiaCellular response to arsenic-containing substance →+0.083+1.684<.001.00134
BLOOD_LeukemiasnRNA metabolic process →+0.035+1.683.001.00634
BLOOD_LeukemiaRegulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay →+0.072+2.656<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,778 associations by consensus.

Positive regulation of protein localization to mitochondrion by HPGDS expression — BLOOD_Leukemia

Box plot of Positive regulation of protein localization to mitochondrion in HPGDS-low vs HPGDS-high samples in BLOOD_Leukemia.

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Exploration