HOXD13

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HOXD13 protein abundance is significantly associated with the RNA expression of many other genes, with 8,088 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible HOXD13-associated genes across cancer lineages are TOM1, PIK3R2, and KLRB1. Each is linked with HOXD13 in more than 1 cancer types. Because this analysis shows association rather than direction, both HOXD13-to-partner and partner-to-HOXD13 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HOXD13 versus TOM1 in LSCC, with a Pearson correlation of 0.57.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HOXD13→partner) and Y-score (partner→HOXD13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCTOM1 →+0.422+0.390.007.00431
LSCCPIK3R2 →-0.154-0.470.003.00531
LSCCKLRB1 →-0.723-0.378.004.00231
LSCCCD244 →-1.087-0.507.009.00431
LSCCRTN2 →+0.651+0.372.004.00731
LSCCTXLNGY →-2.397-0.378.004.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,088 associations by consensus.

HOXD13 vs TOM1 — LSCC

Per-sample scatter of HOXD13 vs TOM1 in LSCC (Pearson r = 0.57).

Explore this scatter interactively →

Exploration