HOXC8

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HOXC8 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,326 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible HOXC8-associated proteins across cancer lineages are MYL9, HOXC10_S189, and VIM_S214. Each is linked with HOXC8 in more than 4 cancer types. Because this analysis shows association rather than direction, both HOXC8-to-partner and partner-to-HOXC8 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HOXC8 versus MYL9 in BRCA, with a Pearson correlation of 0.36.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (HOXC8→partner) and Y-score (partner→HOXC8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAMYL9 →+0.567+1.126<.001<.00135
LUADHOXC10_S189 →+1.661+1.624<.001<.00135
PDACVIM_S214 →+0.526+0.505<.001<.00134
BRCALMCD1 →+0.428+0.650<.001<.00134
BRCALUM →+0.804+0.646<.001<.00134
BRCAMFAP5 →+0.423+0.719<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,326 associations by consensus.

HOXC8 vs MYL9 — BRCA

Per-sample scatter of HOXC8 vs MYL9 in BRCA (Pearson r = 0.36).

Explore this scatter interactively →

Exploration