HOXC13

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HOXC13 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,501 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible HOXC13-associated proteins across cancer lineages are HOXC10_S189, DIP2B, and RHOB. Each is linked with HOXC13 in more than 3 cancer types. Because this analysis shows association rather than direction, both HOXC13-to-partner and partner-to-HOXC13 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HOXC13 versus HOXC10_S189 in LSCC, with a Pearson correlation of 0.76.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (HOXC13→partner) and Y-score (partner→HOXC13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCHOXC10_S189 →+1.838+1.080<.001<.00134
LSCCDIP2B →+0.522+0.754<.001<.00133
LSCCRHOB →+0.620+0.911<.001<.00133
LSCCKRT14 →+1.508+0.738<.001<.00133
HNSCKRT16 →+1.088+0.700<.001.00133
LSCCMBP →-0.264-0.728<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,501 associations by consensus.

HOXC13 vs HOXC10_S189 — LSCC

Per-sample scatter of HOXC13 vs HOXC10_S189 in LSCC (Pearson r = 0.76).

Explore this scatter interactively →

Exploration