HNRNPA1P39

Across TCGA patient cohorts, HNRNPA1P39 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,920 significant associations in total. STAD shows the largest number of these associations.

The most reproducible HNRNPA1P39-associated GO terms across cancer lineages are Regulation of DNA repair, Transcription initiation at RNA polymerase II promoter, and Transcription by RNA polymerase III. Each is linked with HNRNPA1P39 in more than 26 cancer types. Because this analysis shows association rather than direction, both HNRNPA1P39-to-partner and partner-to-HNRNPA1P39 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of DNA repair grouped by HNRNPA1P39-low versus HNRNPA1P39-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (HNRNPA1P39→partner) and Y-score (partner→HNRNPA1P39) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of DNA repair →	+0.051	+0.172	<.001	<.001	3	27
ESCA	Transcription initiation at RNA polymerase II promoter →	+0.059	+0.279	<.001	<.001	3	27
STAD	Transcription by RNA polymerase III →	+0.053	+0.176	<.001	<.001	3	27
STAD	Protein acetylation →	+0.047	+0.116	<.001	<.001	3	27
STAD	rRNA metabolic process →	+0.060	+0.174	<.001	<.001	3	27
ESCA	RNA 3'-end processing →	+0.058	+0.240	.001	<.001	3	27

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,920 associations by consensus.

Regulation of DNA repair by HNRNPA1P39 expression — STAD

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