HMGN2P47

Across TCGA patient cohorts, HMGN2P47 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,871 significant associations in total. KIRC shows the largest number of these associations.

The most reproducible HMGN2P47-associated GO terms across cancer lineages are DNA-templated DNA replication, Mitotic cell cycle checkpoint signaling, and DNA replication. Each is linked with HMGN2P47 in more than 19 cancer types. Because this analysis shows association rather than direction, both HMGN2P47-to-partner and partner-to-HMGN2P47 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DNA-templated DNA replication grouped by HMGN2P47-low versus HMGN2P47-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (HMGN2P47→partner) and Y-score (partner→HMGN2P47) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	DNA-templated DNA replication →	+0.087	+0.265	<.001	<.001	3	20
ESCA	Mitotic cell cycle checkpoint signaling →	+0.063	+0.239	<.001	<.001	3	20
ESCA	DNA replication →	+0.051	+0.180	<.001	<.001	3	19
ESCA	Cell cycle checkpoint signaling →	+0.064	+0.221	<.001	.001	3	19
ESCA	Sister chromatid segregation →	+0.070	+0.233	<.001	<.001	3	19
ESCA	DNA integrity checkpoint signaling →	+0.050	+0.158	<.001	<.001	3	19

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,871 associations by consensus.

DNA-templated DNA replication by HMGN2P47 expression — ESCA

Explore this box plot interactively →