HMGN2P40

Across TCGA patient cohorts, HMGN2P40 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,996 significant associations in total. KIRC shows the largest number of these associations.

The most reproducible HMGN2P40-associated GO terms across cancer lineages are RNA modification, DNA-templated transcription elongation, and tRNA processing. Each is linked with HMGN2P40 in more than 23 cancer types. Because this analysis shows association rather than direction, both HMGN2P40-to-partner and partner-to-HMGN2P40 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA modification grouped by HMGN2P40-low versus HMGN2P40-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (HMGN2P40→partner) and Y-score (partner→HMGN2P40) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	RNA modification →	+0.046	+0.243	<.001	<.001	3	24
STAD	DNA-templated transcription elongation →	+0.052	+0.240	<.001	<.001	3	24
STAD	tRNA processing →	+0.047	+0.266	<.001	<.001	3	23
STAD	Nucleotide-excision repair →	+0.042	+0.248	<.001	<.001	3	23
STAD	rRNA metabolic process →	+0.053	+0.246	<.001	<.001	3	23
STAD	Regulation of DNA-templated transcription elongation →	+0.049	+0.207	<.001	<.001	3	22

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,996 associations by consensus.

RNA modification by HMGN2P40 expression — STAD

Explore this box plot interactively →