HMGN2P2

Across TCGA patient cohorts, HMGN2P2 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,386 significant associations in total. GBM shows the largest number of these associations.

The most reproducible HMGN2P2-associated proteins across cancer lineages are ZNF644_S1189, SMARCC1, and RNASEL. Each is linked with HMGN2P2 in more than 3 cancer types. Because this analysis shows association rather than direction, both HMGN2P2-to-partner and partner-to-HMGN2P2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HMGN2P2 versus ZNF644_S1189 in GBM, with a Pearson correlation of 0.43.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (HMGN2P2→partner) and Y-score (partner→HMGN2P2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	ZNF644_S1189 →	+0.612	+0.391	<.001	.003	3	4
GBM	SMARCC1 →	+0.324	+0.468	<.001	<.001	3	4
BRCA	RNASEL →	-0.364	-0.122	.002	.003	3	4
GBM	SF3B2 →	+0.206	+0.418	<.001	<.001	3	4
GBM	SF3B3 →	+0.218	+0.460	<.001	<.001	3	4
GBM	UTP18 →	+0.257	+0.600	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,386 associations by consensus.

HMGN2P2 vs ZNF644_S1189 — GBM

Explore this scatter interactively →