HMGN2P2

Across TCGA patient cohorts, HMGN2P2 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,820 significant associations in total. STAD shows the largest number of these associations.

The most reproducible HMGN2P2-associated GO terms across cancer lineages are Regulation of chromosome organization, Sister chromatid segregation, and Positive regulation of cell cycle process. Each is linked with HMGN2P2 in more than 19 cancer types. Because this analysis shows association rather than direction, both HMGN2P2-to-partner and partner-to-HMGN2P2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of chromosome organization grouped by HMGN2P2-low versus HMGN2P2-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (HMGN2P2→partner) and Y-score (partner→HMGN2P2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Regulation of chromosome organization →	+0.068	+0.355	<.001	<.001	3	20
ESCA	Sister chromatid segregation →	+0.068	+0.303	.001	<.001	3	19
ESCA	Positive regulation of cell cycle process →	+0.053	+0.279	.002	<.001	2	20
ESCA	Mitotic nuclear division →	+0.063	+0.279	.001	<.001	3	19
ESCA	Spindle organization →	+0.062	+0.277	.001	<.001	3	19
ESCA	Microtubule organizing center organization →	+0.058	+0.302	<.001	<.001	3	18

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,820 associations by consensus.

Regulation of chromosome organization by HMGN2P2 expression — ESCA

Explore this box plot interactively →