HMGN1P24

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HMGN1P24 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,584 significant associations in total. GBM shows the largest number of these associations.

The most reproducible HMGN1P24-associated proteins across cancer lineages are ARHGEF7, CHAMP1, and VEZF1. Each is linked with HMGN1P24 in more than 3 cancer types. Because this analysis shows association rather than direction, both HMGN1P24-to-partner and partner-to-HMGN1P24 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (HMGN1P24→partner) and Y-score (partner→HMGN1P24) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMARHGEF7 →+0.289+0.470<.001.00134
LSCCCHAMP1 →+0.368+0.622<.001<.00134
GBMVEZF1 →+0.261+0.351.003.00233
GBMILF2 →+0.306+0.513<.001.00333
GBMIPO5 →+0.239+0.601<.001<.00133
GBMKPNA3 →+0.233+0.409<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,584 associations by consensus.

Exploration