HMGB3P21

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HMGB3P21 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,649 significant associations in total. STAD shows the largest number of these associations.

The most reproducible HMGB3P21-associated GO terms across cancer lineages are Negative regulation of gene expression, epigenetic, DNA-templated transcription termination, and Peptidyl-lysine methylation. Each is linked with HMGB3P21 in more than 16 cancer types. Because this analysis shows association rather than direction, both HMGB3P21-to-partner and partner-to-HMGB3P21 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (HMGB3P21→partner) and Y-score (partner→HMGB3P21) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADNegative regulation of gene expression, epigenetic →+0.053+0.205<.001<.001317
STADDNA-templated transcription termination →+0.054+0.219<.001<.001317
STADPeptidyl-lysine methylation →+0.047+0.214<.001<.001316
STADProtein polyubiquitination →+0.058+0.212<.001<.001316
STADRNA 3'-end processing →+0.057+0.225<.001<.001316
STADPositive regulation of telomere maintenance →+0.057+0.212<.001<.001316
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,649 associations by consensus.

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