HMGB3P20

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HMGB3P20 RNA expression is significantly associated with the protein abundance of many other proteins, with 4,468 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible HMGB3P20-associated proteins across cancer lineages are KPNA3_S60, PHPT1, and PIK3AP1_S642. Each is linked with HMGB3P20 in more than 2 cancer types. Because this analysis shows association rather than direction, both HMGB3P20-to-partner and partner-to-HMGB3P20 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (HMGB3P20→partner) and Y-score (partner→HMGB3P20) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVKPNA3_S60 →+0.802+0.373.005.00333
BRCAPHPT1 →-0.273-0.206.003.00532
BRCAPIK3AP1_S642 →+0.617+0.238<.001.00632
OVMTSS2_S601 →+0.709+0.371.002<.00132
LUADNAMPT →+0.579+0.092.001.00632
BRCANARF →+0.317+0.171<.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,468 associations by consensus.

Exploration