HMGB1P32

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HMGB1P32 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,070 significant associations in total. STAD shows the largest number of these associations.

The most reproducible HMGB1P32-associated GO terms across cancer lineages are Regulation of cyclin-dependent protein kinase activity, rRNA methylation, and Seminiferous tubule development. Each is linked with HMGB1P32 in more than 7 cancer types. Because this analysis shows association rather than direction, both HMGB1P32-to-partner and partner-to-HMGB1P32 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (HMGB1P32→partner) and Y-score (partner→HMGB1P32) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADRegulation of cyclin-dependent protein kinase activity →+0.078+0.137<.001<.00138
STADrRNA methylation →+0.077+0.143<.001<.00137
STADSeminiferous tubule development →+0.065+0.122<.001<.00137
STADMale sex differentiation →+0.063+0.128<.001<.00137
STADNegative regulation of centrosome duplication →+0.075+0.131<.001<.00136
STADsno(s)RNA metabolic process →+0.070+0.138<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,070 associations by consensus.

Exploration