HMGA1P3

Across TCGA patient cohorts, HMGA1P3 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,029 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible HMGA1P3-associated proteins across cancer lineages are PRPF3, FEN1, and NLRP1. Each is linked with HMGA1P3 in more than 3 cancer types. Because this analysis shows association rather than direction, both HMGA1P3-to-partner and partner-to-HMGA1P3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HMGA1P3 versus PRPF3 in BRCA, with a Pearson correlation of 0.40.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (HMGA1P3→partner) and Y-score (partner→HMGA1P3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	PRPF3 →	+0.231	+0.786	<.001	<.001	3	4
OV	FEN1 →	+0.423	+1.438	<.001	<.001	3	4
LSCC	NLRP1 →	-0.335	-0.458	<.001	<.001	3	3
LSCC	NOC2L →	+0.351	+0.539	<.001	<.001	3	3
LSCC	UTP4 →	+0.306	+0.490	<.001	<.001	3	3
LSCC	RBM19 →	+0.437	+0.506	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,029 associations by consensus.

HMGA1P3 vs PRPF3 — BRCA

Explore this scatter interactively →