HMCN2

Across TCGA patient cohorts, HMCN2 mutation is significantly associated with the total protein of many other genes, with 51 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible HMCN2-associated genes across cancer lineages are ATM, 14-3-3_beta, and EGFR_pY1068. Each is linked with HMCN2 in more than 1 cancer types. Because this analysis shows association rather than direction, both HMCN2-to-partner and partner-to-HMCN2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ATM grouped by HMCN2-low versus HMCN2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HMCN2→partner) and Y-score (partner→HMCN2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	ATM →	-0.661	-2.169	<.001	<.001	3	2
UCEC	14-3-3_beta →	-0.068	-1.673	.028	.040	3	1
UCEC	EGFR_pY1068 →	-0.211	-1.893	.006	<.001	3	1
UCEC	A-Raf_pS299 →	-0.119	-2.700	.001	.005	3	1
UCEC	ERK2 →	+0.197	+2.415	<.001	.002	3	1
UCEC	FOXO3a_pS318_S321 →	-0.080	-1.916	.039	.004	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 51 associations by consensus.

ATM by HMCN2 expression — UCEC

Explore this box plot interactively →