HMCN1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HMCN1 RNA expression is significantly associated with the protein abundance of many other proteins, with 20,347 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible HMCN1-associated proteins across cancer lineages are RAI14, CD248, and GSN. Each is linked with HMCN1 in more than 8 cancer types. Because this analysis shows association rather than direction, both HMCN1-to-partner and partner-to-HMCN1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HMCN1 versus RAI14 in OV, with a Pearson correlation of 0.49.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (HMCN1→partner) and Y-score (partner→HMCN1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVRAI14 →+0.430+1.423<.001<.00139
OVCD248 →+0.629+1.031<.001<.00139
PDACGSN →+0.765+0.718<.001<.00139
BRCAOLFML3 →+0.958+1.413<.001<.00139
BRCAPDGFRB →+0.566+1.609<.001<.00139
OVRCN3 →+0.726+1.428<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 20,347 associations by consensus.

HMCN1 vs RAI14 — OV

Per-sample scatter of HMCN1 vs RAI14 in OV (Pearson r = 0.49).

Explore this scatter interactively →

Exploration