HMCES

mass-spec protein & survival
Survivalmass-specKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, HMCES mass-spec protein is linked to patient survival in 6 of 34 cancer types, making it a survival-associated HMCES data layer compared with 20 for mass-spec protein and 4 for mutation status.

The strongest signal is observed in clear cell renal cell carcinoma (CCRCC), where higher HMCES mass-spec protein is associated with worse overall survival. In most high-consensus cancer types, elevated HMCES expression acts as an unfavorable survival marker, although some lineages such as LUAD and GBM show a favorable association.

CCRCC, HNSC, and LUAD are the cancer types where HMCES mass-spec protein most reproducibly stratifies survival.

mass-spec protein survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
CCRCCOSQuartileAll0.8501.000.00734view →
HNSCDFSMedianIII,IV0.9031.000.00416view →
LUADOSTertileAll0.9550.563.00311view →
GBMDFSMedianAll0.4700.271.0039view →
LSCCDFSQuartileAll0.9990.796.0147view →
COADDFSMedianIV0.4930.944.0316view →
Pink = unfavorable, green = favorable. Showing the 6 strongest of 6 lineages.

Exploration