HLA-S

RNA & survival
SurvivalRNAKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, HLA-S RNA is linked to patient survival in 20 of 34 cancer types, making it the most broadly survival-associated HLA-S data layer.

The strongest signal is observed in skin cutaneous melanoma (SKCM), where higher HLA-S RNA is associated with better overall survival. In most high-consensus cancer types, elevated HLA-S expression acts as an unfavorable survival marker, although some lineages such as SKCM and LIHC show a favorable association.

SKCM, LIHC, and BLCA are the cancer types where HLA-S RNA most reproducibly stratifies survival.

RNA survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
SKCMOSMedianIII,IV0.8020.603<.00177view →
LIHCDFSQuartileIII,IV0.5000.166.00172view →
BLCADFSMedianIII,IV0.6370.345<.00142view →
LGGDFSMedianAll0.2770.543<.00127view →
UVMDFSMedianIII,IV0.3560.697.00821view →
READOSMedianAll1.0000.819.00521view →
DLBCOSMedianAll0.8161.000.01118view →
LUADDFSTertileIV0.4950.969.00116view →
MESOOSMedianAll0.4680.298.00615view →
PAADDFSQuartileII,III,IV0.5620.381.01714view →
KIRCOSMedianII,III,IV0.8670.743.01114view →
THYMDFSQuartileAll0.8121.000.0018view →
Pink = unfavorable, green = favorable. Showing the 12 strongest of 20 lineages.

Exploration