HLA-DRA

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, HLA-DRA RNA differs between tumor and matched normal tissue in 12 of 18 cancer types tested, making tumor–normal expression one of HLA-DRA’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where HLA-DRA RNA is more highly expressed in tumor relative to normal tissue. In most cancer types HLA-DRA is over-expressed in tumor, although a few such as LUAD and KICH show the opposite, repressed pattern.

KIRC, LUAD, and KICH are the cancer types where HLA-DRA tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in HLA-DRA RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRCMaleAll+2.090<.00112view →
LUADMaleII,III,IV−1.790<.0019view →
KICHAllII,III,IV−1.767<.0019view →
LUSCMaleII,III,IV−2.703<.0018view →
THCAMaleIV+3.339<.0017view →
STADFemaleAll+1.895.0184view →
BRCAAllAll+0.407<.0014view →
ESCAAllAll+2.015.0232view →
PAADAllAll−1.912.0312view →
UCECAllAll−1.003.0222view →
CHOLFemaleAll+2.723.0121view →
COADAllAll−0.480.0441view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 12 lineages.

Exploration