HLA-DPB2

RNA & survival
SurvivalRNAKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, HLA-DPB2 RNA is linked to patient survival in 20 of 34 cancer types, making it the most broadly survival-associated HLA-DPB2 data layer.

The strongest signal is observed in skin cutaneous melanoma (SKCM), where higher HLA-DPB2 RNA is associated with better overall survival. In most high-consensus cancer types, elevated HLA-DPB2 expression acts as an unfavorable survival marker, although some lineages such as SKCM and LUSC show a favorable association.

SKCM, UVM, and LGG are the cancer types where HLA-DPB2 RNA most reproducibly stratifies survival.

RNA survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
SKCMOSMedianAll0.3980.281<.001120view →
UVMOSMedianII,III,IV0.6390.944<.00146view →
LGGOSTertileAll0.8440.940<.00140view →
LAMLDFSTertileAll0.3680.594.00734view →
READOSQuartileIII,IV0.6731.000.01227view →
MESODFSTertileIV0.1780.602.00221view →
BLCADFSMedianIV0.1340.294.01015view →
LIHCOSTertileIII,IV0.2010.553<.00115view →
LUSCDFSQuartileIII,IV0.5380.170.00514view →
DLBCOSMedianAll0.5860.955.02210view →
KIRCDFSQuartileIII,IV0.5560.318.0238view →
KICHOSQuartileII,III,IV0.7001.000.0157view →
Pink = unfavorable, green = favorable. Showing the 12 strongest of 20 lineages.

Exploration