HLA-DMA

Mutation & survival
SurvivalMutationKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, HLA-DMA Mutation is linked to patient survival in 6 of 34 cancer types, making it a survival-associated HLA-DMA data layer compared with 25 for mass-spec protein and 7 for mass-spec protein.

The strongest signal is observed in thymoma (THYM), where higher HLA-DMA Mutation is associated with worse overall survival. In most high-consensus cancer types, elevated HLA-DMA expression acts as an unfavorable survival marker, although some lineages such as SKCM show a favorable association.

THYM, OV, and UCEC are the cancer types where HLA-DMA Mutation most reproducibly stratifies survival.

Mutation survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
THYMOSMedianAll0.0680.977<.00124view →
OVDFSMedianII,III,IV0.1400.541.00118view →
UCECOSMedianIV0.0660.755<.00112view →
SKCMDFSMedianIII,IV1.0000.225.0217view →
MESOOSMedianII,III,IV0.1800.560.0463view →
COADOSMedianII,III,IV0.5560.850.0313view →
Pink = unfavorable, green = favorable. Showing the 6 strongest of 6 lineages.

Exploration