HIGD2A

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HIGD2A protein abundance is significantly associated with the RNA expression of many other genes, with 7,410 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible HIGD2A-associated genes across cancer lineages are PMP22, CSF3R, and ANTXR2. Each is linked with HIGD2A in more than 4 cancer types. Because this analysis shows association rather than direction, both HIGD2A-to-partner and partner-to-HIGD2A results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HIGD2A versus PMP22 in OV, with a Pearson correlation of -0.40.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HIGD2A→partner) and Y-score (partner→HIGD2A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVPMP22 →-1.132-0.660<.001<.00135
COADCSF3R →-1.234-0.470<.001<.00135
OVANTXR2 →-1.196-0.569<.001.00135
OVFILIP1L →-1.074-0.484<.001.00735
OVRASL12 →-0.958-0.675<.001<.00134
OVSTX2 →-0.685-0.469<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,410 associations by consensus.

HIGD2A vs PMP22 — OV

Per-sample scatter of HIGD2A vs PMP22 in OV (Pearson r = -0.40).

Explore this scatter interactively →

Exploration