HGSNAT

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HGSNAT RNA expression is significantly associated with the protein abundance of many other proteins, with 8,351 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible HGSNAT-associated proteins across cancer lineages are POLB, FNTA, and VDAC3. Each is linked with HGSNAT in more than 4 cancer types. Because this analysis shows association rather than direction, both HGSNAT-to-partner and partner-to-HGSNAT results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HGSNAT versus POLB in PDAC, with a Pearson correlation of 0.36.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (HGSNAT→partner) and Y-score (partner→HGSNAT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACPOLB →+0.526+0.375<.001<.00135
OVFNTA →+0.243+0.585.001.00535
HNSCVDAC3 →+0.559+0.476<.001<.00134
UCECPOMK →+0.427+0.399.001.00234
GBMCYB5R1 →+0.441+0.251<.001<.00134
LSCCHOOK3 →+0.260+0.668<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,351 associations by consensus.

HGSNAT vs POLB — PDAC

Per-sample scatter of HGSNAT vs POLB in PDAC (Pearson r = 0.36).

Explore this scatter interactively →

Exploration