HGFAC

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HGFAC protein abundance is significantly associated with the RNA expression of many other genes, with 15,751 significant associations in total. GBM shows the largest number of these associations.

The most reproducible HGFAC-associated genes across cancer lineages are LYVE1, IL6, and DIPK2B. Each is linked with HGFAC in more than 6 cancer types. Because this analysis shows association rather than direction, both HGFAC-to-partner and partner-to-HGFAC results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HGFAC versus LYVE1 in GBM, with a Pearson correlation of 0.28.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HGFAC→partner) and Y-score (partner→HGFAC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMLYVE1 →+1.057+0.310.002.00627
GBMIL6 →+1.796+0.569<.001<.00136
CCRCCDIPK2B →+0.622+0.349<.001<.00136
UCECSHE →+0.703+0.324<.001.00736
UCECRHOJ →+0.854+0.316.002.00635
OVHSPA12B →+0.944+0.316.003.00535
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,751 associations by consensus.

HGFAC vs LYVE1 — GBM

Per-sample scatter of HGFAC vs LYVE1 in GBM (Pearson r = 0.28).

Explore this scatter interactively →

Exploration