HFE

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HFE protein abundance is significantly associated with the RNA expression of many other genes, with 14,254 significant associations in total. GBM shows the largest number of these associations.

The most reproducible HFE-associated genes across cancer lineages are FOLR2, RHOH, and CLEC2B. Each is linked with HFE in more than 3 cancer types. Because this analysis shows association rather than direction, both HFE-to-partner and partner-to-HFE results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HFE versus FOLR2 in OV, with a Pearson correlation of 0.53.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HFE→partner) and Y-score (partner→HFE) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVFOLR2 →+1.216+0.599.002.00134
GBMRHOH →+0.911+0.564<.001<.00134
OVCLEC2B →+0.909+0.515.009.00824
OVARHGAP9 →+1.217+0.840<.001.00133
OVIL2RA →+1.118+0.720.001.00333
GBMMYO1G →+0.959+0.585<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,254 associations by consensus.

HFE vs FOLR2 — OV

Per-sample scatter of HFE vs FOLR2 in OV (Pearson r = 0.53).

Explore this scatter interactively →

Exploration