HERC4

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HERC4 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,588 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible HERC4-associated proteins across cancer lineages are SLK, ANXA7, and KIFBP. Each is linked with HERC4 in more than 5 cancer types. Because this analysis shows association rather than direction, both HERC4-to-partner and partner-to-HERC4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HERC4 versus SLK in HNSC, with a Pearson correlation of 0.23.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (HERC4→partner) and Y-score (partner→HERC4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCSLK →+0.315+0.371<.001.00126
BRCAANXA7 →+0.258+0.412<.001<.00135
GBMKIFBP →+0.265+0.373.001<.00134
GBMCCDC6 →+0.390+0.358<.001<.00134
COADADO →+0.320+0.350<.001<.00134
UCECSEC24C →+0.182+0.348<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,588 associations by consensus.

HERC4 vs SLK — HNSC

Per-sample scatter of HERC4 vs SLK in HNSC (Pearson r = 0.23).

Explore this scatter interactively →

Exploration