HERC4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HERC4 protein abundance is significantly associated with the RNA expression of many other genes, with 13,442 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible HERC4-associated genes across cancer lineages are RAD51AP1, TICRR, and CCDC150. Each is linked with HERC4 in more than 6 cancer types. Because this analysis shows association rather than direction, both HERC4-to-partner and partner-to-HERC4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HERC4 versus RAD51AP1 in UCEC, with a Pearson correlation of -0.43.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HERC4→partner) and Y-score (partner→HERC4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRAD51AP1 →-1.162-0.287<.001<.00137
UCECTICRR →-1.124-0.275<.001<.00137
UCECCCDC150 →-0.871-0.238<.001<.00137
UCECKIF18A →-1.037-0.314<.001<.00136
UCECCDCA5 →-1.421-0.301<.001<.00136
GBMXRCC2 →-1.139-0.192<.001.00936
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,442 associations by consensus.

HERC4 vs RAD51AP1 — UCEC

Per-sample scatter of HERC4 vs RAD51AP1 in UCEC (Pearson r = -0.43).

Explore this scatter interactively →

Exploration