HELB

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HELB protein abundance is significantly associated with the RNA expression of many other genes, with 2,492 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible HELB-associated genes across cancer lineages are TRAPPC2P2, ZMYND10, and CCNJ. Each is linked with HELB in more than 1 cancer types. Because this analysis shows association rather than direction, both HELB-to-partner and partner-to-HELB results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HELB versus TRAPPC2P2 in HNSC, with a Pearson correlation of -0.76.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HELB→partner) and Y-score (partner→HELB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCTRAPPC2P2 →-1.057-0.664.007.00232
BRCAZMYND10 →-1.490-0.390.003.00732
OVCCNJ →+0.946+1.363.005.00232
UCECZNF90 →+1.438+0.732.006.00332
UCECMPZL2 →-1.704-0.882.004.00232
UCECCCDC125 →-0.754-0.600.008.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,492 associations by consensus.

HELB vs TRAPPC2P2 — HNSC

Per-sample scatter of HELB vs TRAPPC2P2 in HNSC (Pearson r = -0.76).

Explore this scatter interactively →

Exploration