HDHD5

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HDHD5 protein abundance is significantly associated with the RNA expression of many other genes, with 16,697 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible HDHD5-associated genes across cancer lineages are ATP8B4, CD33, and CLEC2B. Each is linked with HDHD5 in more than 6 cancer types. Because this analysis shows association rather than direction, both HDHD5-to-partner and partner-to-HDHD5 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HDHD5 versus ATP8B4 in GBM, with a Pearson correlation of -0.38.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HDHD5→partner) and Y-score (partner→HDHD5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMATP8B4 →-0.876-0.416<.001<.00137
GBMCD33 →-0.800-0.426<.001<.00137
GBMCLEC2B →-1.180-0.376<.001<.00137
OVMNDA →-1.205-0.472<.001<.00137
GBMDPYD →-1.095-0.426<.001<.00137
OVMEDAG →-1.436-0.483.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,697 associations by consensus.

HDHD5 vs ATP8B4 — GBM

Per-sample scatter of HDHD5 vs ATP8B4 in GBM (Pearson r = -0.38).

Explore this scatter interactively →

Exploration