HDHD3

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HDHD3 protein abundance is significantly associated with the RNA expression of many other genes, with 16,161 significant associations in total. COAD shows the largest number of these associations.

The most reproducible HDHD3-associated genes across cancer lineages are BSPRY, MANSC1, and ALAD. Each is linked with HDHD3 in more than 7 cancer types. Because this analysis shows association rather than direction, both HDHD3-to-partner and partner-to-HDHD3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HDHD3 versus BSPRY in OV, with a Pearson correlation of 0.56.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HDHD3→partner) and Y-score (partner→HDHD3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVBSPRY →+1.166+0.482<.001<.00138
UCECMANSC1 →+0.714+0.271.001.00735
UCECALAD →+0.599+0.341<.001<.00135
GBMSAMD12 →+0.686+0.266<.001.00335
HNSCGALNT12 →+0.947+0.257<.001<.00135
LSCCCYP4F3 →+2.269+0.212<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,161 associations by consensus.

HDHD3 vs BSPRY — OV

Per-sample scatter of HDHD3 vs BSPRY in OV (Pearson r = 0.56).

Explore this scatter interactively →

Exploration