HDGF

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HDGF protein abundance is significantly associated with the RNA expression of many other genes, with 12,635 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible HDGF-associated genes across cancer lineages are C1orf43, TOMM20, and ZNF687. Each is linked with HDGF in more than 7 cancer types. Because this analysis shows association rather than direction, both HDGF-to-partner and partner-to-HDGF results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HDGF versus C1orf43 in HNSC, with a Pearson correlation of 0.29.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HDGF→partner) and Y-score (partner→HDGF) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCC1orf43 →+0.647+0.337<.001<.00138
OVTOMM20 →+0.640+0.520.001<.00138
HNSCZNF687 →+0.737+0.349<.001<.00138
HNSCCLK2 →+0.625+0.328<.001<.00138
UCECDAP3 →+0.607+0.260<.001<.00137
LSCCMRPL9 →+0.614+0.343<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,635 associations by consensus.

HDGF vs C1orf43 — HNSC

Per-sample scatter of HDGF vs C1orf43 in HNSC (Pearson r = 0.29).

Explore this scatter interactively →

Exploration