HDC

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, HDC RNA expression is significantly associated with the go_rna of many other GO terms, with 2,335 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible HDC-associated GO terms across cancer lineages are Negative regulation of syncytium formation by plasma membrane fusion, Negative regulation of myoblast fusion, and Negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay. Each is linked with HDC in more than 8 cancer types. Because this analysis shows association rather than direction, both HDC-to-partner and partner-to-HDC results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of syncytium formation by plasma membrane fusion grouped by HDC-low versus HDC-high in BLOOD_Leukemia.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (HDC→partner) and Y-score (partner→HDC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaNegative regulation of syncytium formation by plasma membrane fusion →+0.040+2.068.002<.00139
BLOOD_LeukemiaNegative regulation of myoblast fusion →+0.042+2.035.001<.00138
BLOOD_LeukemiaNegative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay →+0.044+1.953.003.00636
BLOOD_LeukemiaCytoplasmic translation →+0.046+3.637<.001<.00136
URINARY_TRACTRegulation of RNA splicing →+0.071+0.094<.001.00236
LARGE_INTESTINEViral translational termination-reinitiation →+0.076+0.096.004.00127
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,335 associations by consensus.

Negative regulation of syncytium formation by plasma membrane fusion by HDC expression — BLOOD_Leukemia

Box plot of Negative regulation of syncytium formation by plasma membrane fusion in HDC-low vs HDC-high samples in BLOOD_Leukemia.

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Exploration