HBM

mass-spec protein & survival
Survivalmass-specKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, HBM mass-spec protein is linked to patient survival in 4 of 34 cancer types, making it a survival-associated HBM data layer compared with 15 for mass-spec protein.

The strongest signal is observed in uterine corpus endometrial carcinoma (UCEC), where higher HBM mass-spec protein is associated with worse disease-free survival. In most high-consensus cancer types, elevated HBM expression acts as an unfavorable survival marker, although some lineages such as CCRCC and LUAD show a favorable association.

UCEC, CCRCC, and PDAC are the cancer types where HBM mass-spec protein most reproducibly stratifies survival.

mass-spec protein survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
UCECDFSQuartileIII,IV0.1901.000.01012view →
CCRCCDFSMedianIII,IV0.8740.429.0215view →
PDACOSMedianAll0.2960.572.0175view →
LUADOSMedianAll0.9080.772.0194view →
Pink = unfavorable, green = favorable. Showing the 4 strongest of 4 lineages.

Exploration