HBM

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HBM protein abundance is significantly associated with the RNA expression of many other genes, with 1,776 significant associations in total. GBM shows the largest number of these associations.

The most reproducible HBM-associated genes across cancer lineages are HBB, HBA1, and HBA2. Each is linked with HBM in more than 7 cancer types. Because this analysis shows association rather than direction, both HBM-to-partner and partner-to-HBM results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HBM→partner) and Y-score (partner→HBM) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACHBB →+2.196+0.725.003.00738
GBMHBA1 →+1.645+0.802<.001<.00137
PDACHBA2 →+1.975+0.796.002.00227
CCRCCALAS2 →+1.202+1.129<.001<.00135
CCRCCHEMGN →+0.975+1.587<.001<.00134
GBMPF4 →+0.772+0.616<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,776 associations by consensus.

Exploration