HAVCR1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, HAVCR1 RNA expression is significantly associated with the go_rna of many other GO terms, with 1,540 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible HAVCR1-associated GO terms across cancer lineages are Negative regulation of calcium ion export across plasma membrane, Positive regulation of intracellular steroid hormone receptor signaling pathway, and Positive regulation of amino acid metabolic process. Each is linked with HAVCR1 in more than 5 cancer types. Because this analysis shows association rather than direction, both HAVCR1-to-partner and partner-to-HAVCR1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of calcium ion export across plasma membrane grouped by HAVCR1-low versus HAVCR1-high in SKIN.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (HAVCR1→partner) and Y-score (partner→HAVCR1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINNegative regulation of calcium ion export across plasma membrane →+0.047+0.080<.001.00136
BREASTPositive regulation of intracellular steroid hormone receptor signaling pathway →+0.146+0.093.001.00126
KIDNEYPositive regulation of amino acid metabolic process →-0.275-3.269.001.00835
OVARYRegulation of kidney size →+1.558+2.983<.001<.00135
SKINCortical actin cytoskeleton organization →+0.068+0.095.004.00535
LIVERNegative regulation of cartilage development →-0.191-3.421.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,540 associations by consensus.

Negative regulation of calcium ion export across plasma membrane by HAVCR1 expression — SKIN

Box plot of Negative regulation of calcium ion export across plasma membrane in HAVCR1-low vs HAVCR1-high samples in SKIN.

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